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GENERAL
TITLE
YEAST RNA POLYMERASE II TRANSCRIPTION PRE-INITIATION COMPLEX WITH INITIAL TRANSCRIPTION BUBBLE
DATE LAST MODIFIED
4 Aug 2021
RELEASE
16 Jun 2021
OBSOLETE
CLASSIFICATION
TRANSCRIPTION
EXPERIMENT TYPE
ELECTRON MICROSCOPY
SPACE GROUP
P 1
RESOLUTION RANGE HIGH
3.2
RESOLUTION RANGE LOW
3.2
PUBMED ID
DOI
10.1016/J.CELL.2021.05.012
PDBe
--
LIGANDS
--

Chains

Structure ChainTarget ProteinGeneExpression SystemOrganismSynonimsActions
Q3LSM4 RAD3, REM1, YER171W TRICHOPLUSIA NI BAKER'S YEAST
TFIIH SUBUNIT XPD,DNA REPAIR HELICASE RAD3,RNA POL ...
P43490 TFB1, YDR311W, D9740.3 TRICHOPLUSIA NI BAKER'S YEAST
TFIIH SUBUNIT TFB1,RNA POLYMERASE II TRANSCRIPTION ...
Q8C9A2 TFB2, YPL122C TRICHOPLUSIA NI BAKER'S YEAST
TFIIH SUBUNIT TFB2,RNA POLYMERASE II TRANSCRIPTION ...
Q03290 TFB3, RIG2, YDR460W TRICHOPLUSIA NI BAKER'S YEAST
RNA POLYMERASE II TRANSCRIPTION FACTOR B 38 KDA SU ...
Mutations
Q12004 TFB4, YPR056W TRICHOPLUSIA NI BAKER'S YEAST
TFIIH SUBUNIT TFB4,RNA POLYMERASE II TRANSCRIPTION ...
Mutations
P0DTC2 TFB5, YDR079C-A TRICHOPLUSIA NI BAKER'S YEAST
TFIIH SUBUNIT TFB5,RNA POLYMERASE II TRANSCRIPTION ...
P38501 SSL1, YLR005W TRICHOPLUSIA NI BAKER'S YEAST
TFIIH SUBUNIT SSL1,RNA POLYMERASE II TRANSCRIPTION ...
Q00578 SSL2, LOM3, RAD25, UVS112, YIL143C TRICHOPLUSIA NI BAKER'S YEAST
TFIIH SUBUNIT XPB,DNA REPAIR HELICASE RAD25,RNA PO ...
Mutations
Q8C9A2 -- -- BAKER'S YEAST
RNA POLYMERASE II SUBUNIT B1,DNA-DIRECTED RNA POLY ...
P08518 -- -- BAKER'S YEAST
RNA POLYMERASE II SUBUNIT 2,B150,DNA-DIRECTED RNA ...
Mutations
NGL Viewer is used for the molecular visualization.
  • AS Rose, AR Bradley, Y Valasatava, JM Duarte, A Prlić and PW Rose. NGL viewer: web-based molecular graphics for large complexes. Bioinformatics: bty419, 2018. doi:10.1093/bioinformatics/bty419
  • AS Rose and PW Hildebrand. NGL Viewer: a web application for molecular visualization. Nucl Acids Res (1 July 2015) 43 (W1): W576-W579 first published online April 29, 2015. doi:10.1093/nar/gkv402